BIOMAT - Mathematical and Computational Biology Consortium

  BIOMAT 2005

03rd - 08th December

 

SATURDAY

SUNDAY

MONDAY

TUESDAY

WEDNESDAY

THURSDAY

08:30

 

OP

 

09:00

TT1

TT1

KN1

KN5

KN8

KN12

09:30

10:00

CP1

CP9

CP16

CP24

10:30

TT2

TT2

CP2

CP10

CP17

CP25

11:00

KN2

KN6

KN9

KN13

11:30

12:00

LUNCH

LUNCH

LUNCH

LUNCH

LUNCH

LUNCH

13:00

TT3

TT3

KN3

CP11

KN10

CP26

13:30

CP12

CP27

14:00

CP3

KN7

CP18

KN14

14:30

TT4

TT4

CP4

CP19

15:00

PS + CB1

PS + CB2

PS + CB3

PS + CB4

15:30

KN4

CP13

KN11

CP28

16:00

ME

SP

CP14

CP29

16:30

CP5

CP15

CP20

CP30

17:00

CP6

RT

CP21

CS

17:30

CP7

CP22

18:00

CP8

CP23

18:30

DD

MC

DB

        

OP - Opening Ceremony

TT - Tutorial

KN - Keynote Speaker (50min + 10 min)

CP - Contributed Paper (Oral) (25min +05min)

PS - Contributed Papers (Poster)

CB - Coffee Break

RT - Round Table - Proposals for next symposia

CS - Closing Session - Place of the next BIOMAT Symposium

         Membership of the BIOMAT Consortium

ME - Excursion to Museum of Empire

          Buses depart from LNCC at 16:30

SP - Sightseeing of Petrópolis surroundings

        Buses depart from LNCC at 16:30

        Refreshments at LNCC at 19:00

DD - Dinner at downtown

         Buses depart from LNCC at 19:00

         Keynote Speakers and Leaders of Research Groups stand as special guests

MC - Music Concert and Cocktail at Crystal Palace

          Buses depart from LNCC at 19:00

          Free for all registered participants

DB - Dinner on a barbecue steak house at 19:00

         Walk distance from LNCC

    

TT - TUTORIALS:

TT1 – Luiz Alberto Díaz Rodrigues (UFSM - RS, Brazil)

Spatially Structured Discrete Models in Population Dynamics

TT2 – Pierre Baldi (University of California, Irvine, USA)

Exploring                 Exploring Chemical Space with Computers: Challenges and Opportunities for AI and Machine Learning

TT3 – Rodney C. Bassanezi (State University of Campinas - SP, Brazil)

P-Fuzzy Modelling Methods of Biological Phenomena

TT4 – Marat Rafikov (UNIJUI - RS, Brazil)

                                Control Optimization of Chaotic Population Systems

Chair (Saturday): Maurício V. Kritz

Chair (Sunday): Rui M. Dilão

ntrol Optimization of Chaotic Population Systems 

KN - KEYNOTE SPEAKERS: 

KN1 – Frederick W. Cummings

On the Origin of Metazoans

(Chair: Rubem P. Mondaini)

 

KN2 – Christodoulos Floudas

Structure Prediction of Alpha-Helical Proteins

(Chair: Rui M. Dilão)

 

KN3 – Pierre Baldi

Exploring Chemical Space with Computers: Informatics Challenges for AI and Machine Learning

(Chair: Luiz Bevilacqua)

 

KN4 – Jorge Velasco-Hernández

Theoretical study of a biofilm life cycle: growth, nutrient depletion and detachment

(Chair: Frederick Cummings)

 

KN5 – Panos Pardalos

On Biclustering with Feature Selection for Microarray Data Sets

(Chair: Christodoulos Floudas)

 

KN6 – James MacGregor Smith

Steiner Minimal Trees and Twist Angles in Folded Protein Structures

(Chair: Jorge Velasco-Hernández)

 

KN7 – Eduardo Massad

Modeling Plague Dynamics: Endemic States, Outbreaks and Epidemic Waves

(Chair: Panos Pardalos)

 

KN8 – Philip Maini

Modelling Aspects of Vascular Cancer Development

(Chair: James MacGregor Smith)

 

KN9 – Ruy Ribeiro

Modeling the in vivo Dynamics of Viral Infections

(Chair: Eduardo Massad)

 

KN10 – Guy Perrière

Optimization of Between Group Analysis of gene expression disease class prediction

(Chair: Philip Maini)

 

KN11 – Rui M. Dilão

Software Tool to Model Genetic Regulatory Networks: Applications to Segmental Patterning in Drosophila

(Chair: Louis Gross)

 

KN12 – Andreas Deutsch

Modelling Cooperative Phenomena in Interacting Cell Systems with Cellular Automata

(Chair: Ruy Ribeiro)

 

KN13 – Anna Tramontano

Quality and effectiveness of protein structure comparative models

(Chair: Andreas Deutsch)

 

KN14 – Louis Gross

Space: the final frontier of control theory in application to natural resource management

(Chair: Rubem P. Mondaini)

 

CP - CONTRIBUTED PAPERS (Oral):

CP1 – Tor A. Kwembe, Shatondria N. Jones

A Mathematical Analysis of Cylindrical Shaped Aneurysms       

CP2 – Geraldo Ceni Coelho, Pedro Augusto Pereira Borges

Mathematical modelling of litter decomposition and accumulation in a forest plantation – a transient case

            (Chair: Anna Tramontano)


 

CP3 – Gustavo Lacerda Costa, L.A. Digiampietri, E.H. Ostroski, J.C. Setúbal

Evaluation of Graph Based Protein Clustering Methods

CP4 – Cláudio Meneses, Panos Pardalos, Mauricio Resende, Alkis Vazakopoulos

Modeling and Solving String Selection Problems   

            (Chair: Andreas Deutsch)

 

             CP5 – Luiz Alberto Diaz Rodrigues, Denílson José Seidel

             Pattern Formation in Reaction-Diffusion Discrete Models

             CP6 – Marcio André dell’Aglio, Oleg Khatchatourian

Application of Artificial Neural Network for Morphologic Test of the Erythrocytes in the Anemia

CP7 – Samuel Jaramillo Flórez

Solution of the Electromagnetic Fields of Biological Antennas using the Boundary Elements Method (BEM)

CP8 – Michal Or-Guil

Clonal expansion of cytotoxic T cell clones: The role of the immunoproteasome

            (Chair: Pierre Baldi)


 

CP9 – Ana Paula Wyse, Luiz Bevilacqua, Marat Rafikov

The Basic Reprodutive Rate for a Malaria Model

CP10 – Diomar C. Mistro, Maria Cristina Varriale, Veraci L. Grings

The Role of Spatial Refuge and Oriented Movement on the Host-Parasitoid Dynamics of Nicholson-Bailey

            (Chair: Rodney C. Bassanezi)

 

CP11 – Armando G.M. Neves, Carlos H.C. Moreira

The mitochondrial Eve in an exponentially growing population and a critique to the Out of Africa model for human evolution

CP12 – Laurita dos Santos, Rogério J. Panis Filho, Günther Gerhardt

Network approach to DNA sequence analysis

(Chair: Michal Or-Guil)

 

CP13 – Marcelo Trindade dos Santos, Maurício Vieira Kritz

On the hierarchical organization of metabolic networks: an underlying mathematical model

CP14 – Mariano Rodriguez Ricard, C.T. González-González, Rodney C. Bassanezi

Epidemiologial Model with Fast Dispersion

CP15 – Robersy Sánchez, Ricardo Grau, Eberto R. Morgado

A New DNA Sequence Vector Space on a Genetic Code Galois Field

(Chair: João Frederico Meyer)

 

CP16 – C.A. Ramirez Bernate, G.L. Diniz

Approximation and Simulation for a Model of Pollutant Dispersal in Spherical Surfaces

CP17 – Ângela Beatriz Weber, Marat Rafikov, Andréia Beatriz Schmidt

Optimal control of Lotka-Volterra system

             (Chair: Maurício V. Kritz)

  

CP18 – Priya Kooner, Philip Maini, David J. Gavagham

Mathematical modeling of the HIF-1 mediated hypoxic response in tumours

CP19 – Leandro Santos Ribeiro, Fabio Alex Pereira dos Santos, Francisco Ferreira de Souza

Chaos and Bifurcation in Infectious Diseases

            (Chair: Marcelo Trindade dos Santos)

 

CP20 – João Francisco Valiati, Paulo Martins Engel

Discovering Similarities in Mycoplasma Promoters: a Clustering Strategy

CP21 – Rogério Salvini, Inês Dutra, Viviane Morelli

Simple and Effective Classifiers to model Biological Data

CP22 – Vincent Hull

A Model for Oxygen Dynamics in Coastal Lagoons

CP23 – Dagmar Iber

What is the immunon? Answers from a new model for B cell signal initiation

            (Chair: Guy Perrière)

 

CP24 – Raul A. Assis, Wilson Castro Ferreira Junior

Swarm Intelligence: the choice of foraging direction in a colony of ants

CP25 – Mariano Rodriguez Ricard, C. Cueto Camejo, Rodney C. Bassanezi

Traveling waves for a model of direct transmission with heterogeneity

            (Chair: Marat Rafikov)

 

CP26 – Gizelle Kupac Vianna, Artur Emilio Reis, Fabio Barreto, Luis A.V. Carvalho

A Neurocomputational Model of the Role of Cholesterol in the Development Process of Alzheimer’s Disease

CP27 – Wanda Aparecida Lopes, Rosana Sueli da Motta Jafelice

Fuzzy Modeling in the Elimination of Drugs      

            (Chair: Anna Tramontano)

                    

CP28 – Santina F. Arantes, J. E.M. Rivera

Optimal Control of Distributed Systems Applied to the Problems of Ambient Pollution

CP29 – José Verdasca

Short and long-term dynamics of childhood diseases on dynamic small-world networks

            (Chair: Mariano Rodriguez Ricard) 

 

PS – CONTRIBUTED PAPERS (POSTER): 

1. Ana Paula C. Rio Doce, Regina C. Almeida, Michel I. S. Costa

An Age-Structured Finite Element Model for the Population Dynamics of a Marine Organism

2. José Karam Filho, Marcio A. A. Bortoloti

Blood Rheology and Some Non-Viscometric Computational Experiments

3. Alain Joan Valdivia

A Model for explaining the propagation of a repetitive unstable gene in a population

4. Dumar Villa

Effects of the Curvature on the Diffusion in Molecular Surfaces

5. Inayá Correa Barbosa Lima, R. Lopes, L. Oliveira

Characterization of the bone trabecular structure – a method with 3D microtomography

6. Luis Henrique Teixeira Caetano, Adriana Braga de Goes Barbosa, Eliana Silva de Almeida, Luiz Antônio Ferreira da Silva

Development of a Bioinformatic Tool for Analysis, Data Storage and Comparisons of Human mtDNA Profiles for Forensic Purposes in Brazil

7. Rubem P. Mondaini

Steiner Trees as Intramolecular Networks of the Biomacromolecular Structures

 

 

 

 

 

  updated on 24/11/05 23:25