BIOMAT Consortium

 BIOMAT Institute for Advanced Studies of Biosystems

 

BIOMAT 2009

 August 01 - 06, Brasilia, DF

 

 

 

SATURDAY

SUNDAY

MONDAY

TUESDAY

WEDNESDAY

THURSDAY

08:30

 

 

OC

 

09:00

TT1

TT1

KS1

KS3

KS5

KS7

09:30

10:00

PS + CB

PS + CB

PS + CB

PS + CB

10:15

PS+CB

 PS+CB

10:30

OS1

OS7

OS13

OS19

10:45

TT2 TT2

11:00

OS2

OS8

OS14

OS20

11:30

OS3 OS9 OS15 OS21

12:00

LUNCH

LUNCH

LUNCH

LUNCH LUNCH LUNCH
12:30

13:00

TT3

TT3 KS2 KS4 KS6 KS8

13:30

14:00

OS4 OS10 OS16 OS22
14:15 PS+CB PS+CB

14:30

PS+CB

PS+CB

PS+CB

PS+CB
14:45 TT4 TT4

15:00

OS5 OS11

OS17

OS23

15:30

OS6 OS12 0S18 OS24

16:00

 

SR

 

 

16:30

17:00

17:30

18:00

       

18:30

  CD

 

OC - Opening Ceremony - BIOMAT 2009 Technical Sessions

TT - Tutorial

KS - Keynote Speaker (50min + 10 min)

OS - Technical Session (Oral) (25min + 05min)

PS  - Technical Session (Posters)

CB - Coffee Break

SR -  Sightseeing of Brasilia and  Reception Cocktail

CD - Conference Dinner

        Keynote Speakers and Leaders of Research Groups stand as special guests

 

   TT - Tutorials:

            AUGUST 01, 02, Saturday, Sunday , Chairman: João Frederico C.A. Meyer, State University of Campinas

 

 

         TT1 - RUBEM MONDAINI - Federal University of Rio de Janeiro
          
                Linear Programming Modelling for Amide Planes of Protein Structures
                
09:00 - 10:15
        
            

TT2-  JOSÉ FERNANDO FONTANARI - University of S. Paulo, S.Carlos

 
                 Mathematical Foundations of the Theory of Molecular Evolution
                
10:45 - 12:00
 
 

TT3 - ROSANA MOTTA JAFELICE - Federal University of Uberlândia

 
                 Modelling Biological Phenomena by using Fuzzy Sets Theory

       13:00 - 14:15

 
 
            TT4 - JOÃO FREDERICO C.A. MEYER - State University of Campinas
          
                 Evolutionary Spread on Population Dynamics Modelling and Aproximation
              
 14:45 - 16:00
           
 
        
          
               
 
 

 

 
 
               
               

      

   KS - Keynote Speakers (50min + 10 min)

 

  KS1 - HELEN M. BYRNE - University of Nottingham, UK 

            Macrophages and Tumours: Friends or Foe?

    Chairman: Rubem P. Mondaini - Federal University of Rio de Janeiro, Brazil

  KS2 - DAVID P. LANDAU - University of Georgia, Athens, GA, USA 

          Monte Carlo Simulations of Protein Models: At the Interface Between Statistical Physics and Biology

    Chairman:  Charles Pearce, University of Adelaide, Australia

  KS3 - CHARLES PEARCE -  University of Adelaide, Australia

-           New Zealand Paleodemography: Pitfalls & Possibilities

    Chairman:  David Landau, University of Georgia, Athens, USA

  KS4 - NICHOLAS F. BRITTON - University of Bath, UK

           Collective Decision-Making: Foraging by Social Insects

    Chairman:  Ludek Berec, Institute of Entomology, Biology Centre, ASCR, Prague,Czech Republic

  KS5 - PANOS M. PARDALOS - University of Florida, Gainesville, FL, USA 

           Spectral Methods for Quantitative Analysis of Electroencephalographic Recordings

    Chairman:  Mario Guarracino, High Performance Computing and Network Institute,  Italian National Research Council, Italy

 

  KS6 - LUDEK BEREC - Institute of Entomology, Biology Centre ASCR, Czech Republic 

           Population Dynamics on Complex Food Webs

   Chairman: Nicholas F. Britton, University of Bath, UK

  KS7 - RICHARD KERNER - Université Pierre et Marie Curie, France 

            Stochastic Matrices as a Tool for Biological Evolution Models

    Chairman:  Panos M. Pardalos, University of Florida, Gainesville, USA

, -  KS8 - Mario Guarracino, High Performance Computing and Network Institute,  Italian National Research Council, Italy

            Protein-Protein interactions prediction using 1-Nearest Neighbors Classification Algorithm and Feature Selection

    Chairman:  Rubem P. Mondaini - Federal University of Rio de Janeiro, Brazil

       

 

   OS - Oral Sessions (25min + 05min)

 

       

        

          OS1  -SIS EPIDEMIC MODEL WITH PULSE VACCINATION STRATEGY AT VARIABLE TIMES
 

                     FERNANDO CÓRDOVA-LEPE, R. DEL-VALLE, G. ROBLEDO

                     Catholic University of Maule, Chile
                     University of Chile, Santiago, Chile
 

         OS2 – MATHEMATICAL MODEL OF THE DYNAMICS OF THE REPRODUCTION OF THE PARASITE TOXOPLASMA GONDII  

                 

                     John Alexander León Marín

                     University of Quindio, Armenia, Quindío, Colombia.
 

                 

           OS3 - CLUSTERING DATA IN CHEMOSYSTEMATICS USING A GRAPH-THEORETIC APPROACH: AN APPLICATION OF MINIMUM SPANNING TREE WITH PENALTY CONCEPT   

              

                    L. S. OLIVEIRA, V. C. SANTOS, L. SILVA, L. MATOS, S. CAVALCANTI

                   Federal University of Sergipe - SE, Brazil

 

 

 CHAIRMAN:  Richard Kerner, Université Pierre et Marie Curie, Paris, France

 

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           OS4 - EFFECT OF MASS MEDIA ON THE CULTURAL DIVERSITY OF AXELROD MODEL OF SOCIAL INFLUENCE

                   JOSÉ F. FONTANARI

                   University of Sao Paulo, Sao Carlos - SP, Brazil    

 

            

  CHAIRMAN:  Charles Pearce, University of Adelaide, Australia

 

 

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           OS5 - SIGLA — A WORKFLOW BASED MANAGEMENT SYSTEM TO INTEGRATE LABORATORY DATA

                   ALEXANDRE MELO, ALESSANDRA FARIA-CAMPOS, RODRIGO KELLER, VINÍCIUS ABREU, SÉRGIO CAMPOS

                   Federal University of Minas Gerais - MG, Brazil

          

          OS6 - CONTROL AND SYNCHRONIZATION OF HODGKIN-HUXLEY NEURONS

                   HECTOR PUEBLA, ELISEO HERNANDEZ-MARTINEZ, JOSE ALVAREZ-RAMIREZ

                   Universidad Autónoma Metropolitana, Mexico                 

     

 

CHAIRMAN:  José Fernando Fontanari - University of S. Paulo, S.Carlos

 

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          OS7 - LESLIE MATRICES AND SURVIVAL CURVES CONTAIN THERMODYNAMICAL INFORMATION

                   FERNANDO R. MOMO, SANTIAGO DOYLE, JOSÉ E. URE

                   National University of General Sarmiento, Los Polvorines, Argentina
                   National University of Luján, Argentina

 

         OS8 - REAL-TIME FORECASTING FOR AN INFLUENZA PANDEMIC IN THE UK FROM PRIOR INFORMATION AND MULTIPLE SURVEILLANCE DATASETS
 

                   G. KETSETZIS, B. COOPER, D. DEANGELIS AND N. GAY

                   Health Protection Agency, NHS, UK

 

          OS9 - EVALUATION OF PHOTO-IDENTIFICATION METHODS ADAPTED TO THE ESTIMATION OF STRAY DOG POPULATION IN THE DISTRICT OF IBIUNA, SAO PAULO, BRAZIL

                   HÉLIO JUNJI SHIMOZAKO, PAULO S. P. SILVEIRA, EURO DE BARROS C. JÚNIOR, EDUARDO MASSAD

                   School of Medicine, University of Sao Paulo, Sao Paulo - SP, Brazil

 

 

CHAIRMAN:  Helen M. Byrne - University of Nottingham, UK

 

 

 

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         OS10 - EVIDENCE OF DETERMINISTIC EVOLUTION IN THE IMMUNOLOGICAL MEMORY PROCESS

                   ALEXANDRE DE CASTRO, CARLOS F. FRONZA, ROBERTO H. HERAI, POLIANA F. GIACHETTO, DOMINGOS ALVES

                   Federal University of São Paulo – UNIFESP
                   State University of Campinas - UNICAMP
                   University of São Paulo, Ribeirao Preto, Brazil

 

CHAIRMAN:  Ludek Berec, Institute of Entomology, Biology Centre, ASCR, Prague,Czech Republic

 

 

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         OS11 - A PROBABILISTIC CELLULAR AUTOMATA TO STUDYING THE SPREADING OF PNEUMONIA IN A POPULATION

                   YURI SAITO, MARCO ANTONIO A. DA SILVA, DOMINGOS ALVES

                   Federal University of Sao Carlos - SP, Brazil

                   University of Sao Paulo, Ribeirao Preto - SP, Brazil

 

         OS12 - ESTIMATING THE SPREAD OF THE HIV INFECTION ON IMMUNE SYSTEM: IMPLICATIONS ON CELL POPULATIONS AND R0 EPIDEMIC CONCEPT

                   MARCELO ROSSI, LUIS FERNANDEZ LOPEZ

                   School of Medicine, University of Sao Paulo, Sao Paulo - SP, Brazil
                   CIARA, Florida International University,  - USA

 

CHAIRMAN:   Panos M. Pardalos, University of Florida, Gainesville, USA

 

 

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         OS13 - DYNAMICS ON THE HOLLING-TANNER PREDATOR-PREY MODEL CONSIDERING AN ALTERNATIVE FOOD FOR PREDATOR

                   CLAUDIO ARANCIBIA-IBARRA, EDUARDO GONZALEZ-OLIVARES

                   Catholic University of Valparaíso, Chile

 

         OS14 - BOUNDARY EFFECTS IN POLYMER TRANSLOCATION THROUGH PORES

                   F. MONDAINI, L. MORICONI

                   Federal University of Rio de Janeiro, Brazil

 

         OS15 - PHENOMENOLOGICAL STUDY OF THE GROWTH RATE OF TRANSFORMED VERO CELLS, CHANGES IN THE GROWTH MODE AND FRACTAL BEHAVIOUR OF COLONY CONTOURS

                   M. A. C. HUERGO, M. A. PASQUALE, A. E. BOLZÁN, A. J. ARVIA

                   INIFTA, La Plata, Argentina
                   National University of La Plata, Argentina

 

CHAIRMAN:   Fernando Córdova-Lepe, University of Maule, Chile

 

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         OS16 - MATHEMATICAL MODELLING OF SUSTAINABLE DEVELOPMENT: AN APPLICATION TO THE CASE OF THE RAIN-FOREST OF MADAGASCAR

                   CLAIRE BERNARD

                   Laboratory of Engineering for Complex Systems, LISC, France

 

 

CHAIRMAN:   Nicholas F. Britton, University of Bath, UK

 

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         OS17 - CONSEQUENCES OF THE DECREASE OF THE SIZE OF THE ENVIRONMENT IN THE INTERACTION PREY-PREDATOR

                   EDILBER ALMANZA-VASQUEZ, ESTEBAN PUELLO-MENDOZA, EDUARDO GONZALEZ-OLIVARES

                   University of Cartagena, Colombia
                   Catholic University of Valparaiso, Chile

 

         OS18 - FRACTAL AND NONLINEAR ANALYSIS OF BIOCHEMICAL TIME SERIES

                   HECTOR PUEBLA, ELISEO HERNANDEZ-MARTINEZ, JOSE ALVAREZ-RAMIREZ

                   Universidad Autónoma Metropolitana, Mexico

 

 CHAIRMAN:   Charles Pearce -  University of Adelaide, Australia

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        OS19 - REGULATION BY OPTIMAL TAXATION OF AN OPEN ACCESS SINGLE-SPECIES FISHERY CONSIDERING ALLEE EFFECT ON RENEWABLE RESOURCE

                   ALEJANDRO ROJAS-PALMA, EDUARDO GONZÁLEZ-OLIVARES

                   Catholic University of Valparaíso, Chile

 

        OS20 - THE ELECTRONIC MEDICAL RECORDS AS A TOOL FOR ASSESSMENT AND CLINICAL DECISION SUPPORT FOR PHYSIOTHERAPEUTICS

                   CARLOS F. FRONZA, FERNANDA C. A. O. FRONZA, ALEXANDRE DE CASTRO, DOMINGOS ALVES

                   Federal University of São Paulo, UNIFESP, Brazil

 

        OS21 - SIMULATION OF ELECTROMAGNETIC FIELDS IN THE INNER OF A BIOLOGICAL TISSUE USING THE BOUNDARY ELEMENTS METHOD (BEM)

                   SAMUEL A. JARAMILLO FLÓREZ

                   University of Quindio, Armenia, Colombia

 

 

CHAIRMAN:   João Frederico C.A. Meyer - State University of Campinas

 

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          OS22 - A CHECK ON THE HOMOGENEITY OF TEMPERATURE OF THE CLIMATIC CHAMBER WK111/180
-

                   Marcos Lopes Lima, Olga E. S. Dick, J. G. P. Peixoto, D. Quaresma

                   Institute of Radiation Protection and Dosimetry (IRD), National Commission of Nuclear Energy (CNEN), Rio de Janeiro, Brazil.

 

 

 

 

CHAIRMAN:   Rubem P. Mondaini - Federal University of Rio de Janeiro, Brazil

 

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          OS23 - NATURAL CLUSTERING USING PYTHON

                   DANIEL R. ESPANHOL, CARLOS D. MACIEL, SUELY P. OLIVEIRA, JOSÉ C. PEREIRA

                   Sao Paulo Federal Institute - SP, Brazil
                   University of São Paulo, Sao Carlos - SP, Brazil
                   University of Iowa, USA

 

 

CHAIRMAN:   Mario Guarracino, High Performance Computing and Network Institute,  Italian National Research Council, Italy

 

 

 

       CLOSING SESSION -  CHAIRMAN: Nicholas F. Britton

 

 


                
 

 
 

 

  PS - Contributed Papers (Posters )

            
        
   1.  EVOLUTIONARY ALGORITHMS APPROACHES FOR THE PROTEIN STRUCTURE PREDICTION WITH NEW CRITERIA
 

                CHRISTIANE R. S. BRASIL, ALEXANDRE . B. DELBEM, DANIEL R. F. BONETTI, EDUARDO DE FRANCA FARIA, FERNANDO L. B. DA SILVA                

                University of Sao Paulo, Sao Carlos - SP, Brazil

                University of Sao Paulo, Ribeirao Preto - SP, Brazil

          

            2.  Reflectivity and Transmission Losses of Vegetable Organs for Calculating their Bio-electromagnetic Properties

               

                 SAMUEL A. JARAMILLO FLÓREZ

                 University of Quindio, Armenia, Colombia


          
3.  CLASSIFICATION OF THE QUALITY OF THE COFFEE USING METHODS NUMERICAL AND MEASURES IN MICROWAVE FREQUENCIES                

                 SAMUEL A. JARAMILLO FLÓREZ

                 University of Quindio, Armenia, Colombia

          4.  CONTRIBUTION OF WATERBORNE TRANSPORT IN THE SPREAD OF INFECTION WITH TOXOPLASMA GONDII

               Irene Duarte Gandica, Deccy Yaneth Trejos Angel 

               University of Quindio, Armenia, Colombia

        

           5.  Soft-observers for state estimation in biochemical systems

                

                Ricardo Aguilar-Lopez, Ricardo Acevedo, Hector Puebla, Carolina González Campuzano

                CINVESTAV-IPN, Mexico
                Universidad Autónoma Metropolitana, Mexico

           

           6.  MATHEMATICAL ANALYSIS OF GROWTH AND DEATH RATES OF AEDES AEGYPTIS MOSQUITOES AT SEVERAL TEMPERATURES

 

                      MARCELO ROSSI, EDUARDO MASSAD, LÊUDA OLÍVÊR

                University of Sao Paulo, Sao Paulo - SP, Brazil


          
7.  A BIT OF DYNAMIC GEOMETRY IN BIOLOGY: SOME EXAMPLES

 

               GERUSA ALEXSANDRA DE ARAÚJO, HUMBERTO JOSÉ BORTOLOSSI             
               UFF - RJ, Brazil

            8.  Statistical Pattern Recognition and MLP Artificial Neural Networks in Protein Secondary Structure Prediction

                Emerson Cordeiro Morais

                Federal University of Rio de Janeiro, Brazil

          
9 - EVALUATION OF STEMMING ALGORITHMS BASED ON COMMON ERRORS

 

                  REINALDO VIANA ALVARES         

                   Federal University of Rio de Janeiro, Brazil

 

          10. EXON PREDICTION PROBLEM USING GENETIC ALGORITHMS AS AN APPROACH FOR HYPOTHESIS TESTING

          

                 EDGAR A. G. G. AMARAL

                 Federal University of Rio de Janeiro, Brazil

            11.  AN ALGORITHM FOR SELECTING TERMS OF SAME HIGHER ORDER IN THE MODELLING OF PROTEIN STRUCTURE

                   SANDRO VILELA        

                  Federal University of Rio de Janeiro, Brazil

 

             12.  POLYMER TRANSLOCATION

                  FELIPE MONDAINI     

                   Federal University of Rio de Janeiro, Brazil

 

   

            13. EFFECTS OF THE EVOLUTIONARY SPREAD OF A CONTAMINANT IN THE POPULATION DYNAMICS AND DISPERSAL IN AN AQUATIC ENVIRONMENT: MODELING AND APROXIMATION

 

                 MONICA JHOANA MESA MAZO

                 Universidad del Quindio, Colombia

 

 

.          14. EVOLUTIONARY MODELING OF THE DISTRIBUTION OF TOXIC AGENTS IN A WATER

 

                 JUAN GABRIEL VERGAÑO SALAZAR

                 Universidad del Quindio, Colombia

                

                             

 
 
 

 

 

 

 

 updated on 24/02/10 19:01